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Proof-editing is the Bottleneck Of 3D Neuron Reconstruction: The Problem and Solutions

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Fig. 1

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  1. Peng H, Ruan Z, Long F, Simpson JH, Myers EW, (2010) "V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets," Nature Biotechnology, 28(4): 348-353.

  2. Peng H, Ruan Z, Atasoy D, Sternson S, (2010) "Automatic reconstruction of 3D neuron structures using a graph-augmented deformable model," Bioinformatics, 26(12): i38-i46.

  3. Bas E, Erdogmus D (2011) Principal Curves as Skeletons of Tubular Objects: Locally Characterizing the Structures of Axons. Neuroinformatics, doi:10.1007/s12021-011-9105-2.

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  6. Zhao T, Xie J, Amat F, Clack N, Ahammad P, Peng H, Long F, Myers E (2011) Automated Reconstruction of Neuronal Morphology Based on Local Geometrical and Global Structural Models. Neuroinformatics, doi:10.1007/s12021-011-9120-3.

  7. Wang Y, Narayanaswamy A, Tsai C-L, Roysam B (2011) A Broadly Applicable 3-D Neuron Tracing Method Based on Open-Curve Snake. Neuroinformatics, doi:10.1007/s12021-011-9110-5.

  8. Narayanaswamy A, Wang Y, Roysam B (2011) 3-D Image Pre-processing Algorithms for Improved Automated Tracing of Neuronal Arbors. Neuroinformatics, doi:10.1007/s12021-011-9116-z.

  9. Luisi J, Narayanaswamy A, Galbreath Z, Roysam B, (2011) The FARSIGHT Trace Editor: An Open Source Tool for 3-D Inspection and Efficient Pattern Analysis Aided Editing of Automated Neuronal Reconstructions. Neuroinformatics, doi:10.1007/s12021-011-9115-0.

Acknowledgment

We thank Chris Zugates, Fernando Amat, and Margaret Jefferies for reading and commenting on a draft of the manuscript.

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Correspondence to Hanchuan Peng.

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Peng, H., Long, F., Zhao, T. et al. Proof-editing is the Bottleneck Of 3D Neuron Reconstruction: The Problem and Solutions. Neuroinform 9, 103–105 (2011). https://doi.org/10.1007/s12021-010-9090-x

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